Repository navigation

feat: Updates for 10x Genomics Atera bundles - #426

Open

stephenwilliams22 wants to merge 13 commits into

scverse:mainfrom

10XGenomics:atera-reader

Open

feat: Updates for 10x Genomics Atera bundles#426
stephenwilliams22 wants to merge 13 commits into
scverse:mainfrom
10XGenomics:atera-reader

Commits on Sep 29, 2026
- Add atera reader for 10x Genomics Atera bundles
  
  stephenwilliams22
  and
  claude
  committed
  1b7bfb5
- unzip dataset in Jupyter notebook
  stephenwilliams22
  authored
  3ec4bc7
- notebook fix
  stephenwilliams22
  authored
  cc68968
- Update git clone command in Atera example notebook
  stephenwilliams22
  authored
  83092dd
Commits on Oct 1, 2026
- update notebook
  stephenwilliams22
  committed
  318b6b7
- get pixel size from morphology image
  stephenwilliams22
  committed
  04a4bd7
Commits on Oct 2, 2026
- fixes for pre-commit
  stephenwilliams22
  committed
  7f3ce55
- Remove .gitignore
  
  stephenwilliams22
  and
  claude
  committed
  8e65a43
- Restore .gitignore, synced with main
  
  stephenwilliams22
  and
  claude
  committed
  91ed96d
Commits on Oct 5, 2026
- add atera transcrips zarr to proseg parquet converter
  stephenwilliams22
  committed
  9ed1b37
Commits on Oct 7, 2026
- rename atera_to_proseg to atera_to_parquet
  stephenwilliams22
  committed
  460bcb0
- rename fix
  stephenwilliams22
  committed
  dd1d772
Commits on Oct 15, 2026
- updates to atera_to_parquet
  stephenwilliams22
  committed
  36804c7