Issues

• Question about pyscenic run time and memory usage, and potential updates to workflow?

  hbc/knowledgebase#130 · Filter by author liezeltamon opened on Jun 1, 2024
  2

• add a lesson on GEO submissions

  category-researchsubcategory-general_ngs
  hbc/knowledgebase#104 · Filter by author mistrm82 opened on Jun 14, 2019
  1

  

• Reduce time for single cell markers visualization

  category-researchdocssubcategory-scrnaseq
  hbc/knowledgebase#93 · Filter by author lpantano opened on Mar 8, 2019
  1

• single cell materials - tutorials, templates and scripts

  category-researchsubcategory-scrnaseq
  hbc/knowledgebase#73 · Filter by author marypiper opened on Oct 18, 2018
  1

  

• bcbio to STREAM

  hbc/knowledgebase#52 · Filter by author mjsteinbaugh opened on Aug 17, 2018
  

• Installing a versioned bcbio release

  hbc/knowledgebase#51 · Filter by author mjsteinbaugh opened on Aug 16, 2018
  2

  

• How to get access to and download data from dbGap

  docs
  hbc/knowledgebase#28 · Filter by author sjhosui opened on Aug 8, 2018
  1

  

• suggestion: useful references document

  hbc/knowledgebase#27 · Filter by author jnhutchinson opened on Aug 7, 2018
  2

  

• Example Cell Ranger load scripts

  docssubcategory-scrnasequrgent
  hbc/knowledgebase#25 · Filter by author mjsteinbaugh opened on Aug 3, 2018
  

• Arranging multidimensional data along a 2d curve

  subcategory-rnaseqsubcategory-scrnaseq
  hbc/knowledgebase#23 · Filter by author roryk opened on Aug 3, 2018
  1

  

• Spacemacs (emacs/vim) setup

  category-computingsubcategory-tips and tricks
  hbc/knowledgebase#22 · Filter by author roryk opened on Aug 3, 2018
  6

• Add genome usage information

  category-research
  hbc/knowledgebase#20 · Filter by author vbarrera opened on Aug 3, 2018
  1

• normalized counts saved by bcbioRNAseq

  feature requestsubcategory-rnaseq
  hbc/knowledgebase#12 · Filter by author rkhetani opened on Jul 27, 2018

• IRFinder

  feature requestsubcategory-rnaseq
  hbc/knowledgebase#10 · Filter by author roryk opened on Jul 27, 2018

• Tryout Alevin for single-cell counting

  feature requestsubcategory-scrnaseq
  hbc/knowledgebase#9 · Filter by author roryk opened on Jul 27, 2018
  2

• how to transfer raw data between universities

  docs
  hbc/knowledgebase#7 · Filter by author lpantano opened on Jul 27, 2018 · First version
  5