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Add skipper-clipper-compare 1.0.0 image - #20
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Pinned Python 3.12 / bedtools / pybedtools / pandas / scipy / matplotlib / seaborn / matplotlib-venn environment for skipper-clipper-snakemake's Skipper-vs-CLIPper comparison script. Tools are on PATH without activation for Singularity, and the build checks every import and bedtools. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
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Summary
images/skipper-clipper-compare/1.0.0/: a pinned micromamba (digest-pinned base) environment for skipper-clipper-snakemake's Skipper-vs-CLIPper comparison script. Contents: Python 3.12, bedtools 2.31.1, pybedtools 0.12.0, pandas 2.2.3, numpy 2.2.6, scipy 1.15.2, matplotlib 3.10.3, seaborn 0.13.2, matplotlib-venn 1.1.2.PATHwithout activation, so the image works under Singularity/Apptainer. The build fails if any import orbedtoolsis broken.Verification
ghcr.io/yeolab/skipper-clipper-compare:1.0.0(sha256:088766c7e8bb87fc051486131a2ed60fc20c1aa637159634b83e3f5af0d1af97).bedtools v2.31.1OK. The same environment spec ran the comparison on real EIF3C_K562_5060 data.🤖 Generated with Claude Code