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NDR-python — binary-reader correctness fixes, new readers, lint normalization - #9

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audriB wants to merge 22 commits into

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audriB:exp/backend-hardening-2026-07

Commits on Jun 12, 2026
Commits on Jul 5, 2026
- feat(reader): add vld, tiffstack, prairieview readers (+ vld symmetry test)
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- test(symmetry): add tiffstack + prairieview cross-language symmetry tests
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Commits on Jul 10, 2026
- Merge branch 'feat/ndr-readers-vld-tiffstack-prairieview' into feat/ndr-python-2026-06-consolidated
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Commits on Jul 22, 2026
- fix(intan): size data blocks from the header (60 v1 / 128 v2+) instead of hardcoding 60
  
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- fix(intan): size the temp-sensor block from num_temp_sensor_channels (0 or 2 bytes), not per supply channel
  
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- fix(intan): map digital channels by native_order and bounds-check the request
  
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- fix(spikegadgets): correct the per-sample stride (header+4+channel) in the analog and trode readers
  
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- fix(spikegadgets): raise on short reads instead of returning np.empty memory
  
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- fix(ced): return the requested channel's time vector, not analogsignals[0]
  
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- fix(ced): resolve stream index before sizing and use stream-relative channel indexes
  
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- fix(axon): restore the caller's channel order after the sorted read
  
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- fix(deps): declare tifffile and scipy in the formats extra; make the tiffstack import lazy
  
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- fix(time): use MATLAB round-half-away-from-zero at all four sample-boundary sites
  
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- test(symmetry): point the Intan parity tests at example.rhd and fix the reader class name
  
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  1c47381
- ci: run src/ndr/test, install the formats extra, unfail the dispatch test
  
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- test: add regression tests for the binary-reader correctness fixes
  
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Commits on Aug 24, 2026
- style: run black at the repo's configured line-length 100
  
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- lint: clear the 50 ruff errors in the prairieview modules
  
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  b84e845