docs: render the 4 regolith community pages (000308-000311)#239
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The regolith records curated in #232/#233 (Mars meteorite growth panel, Mars-regolith cyanobacteria biofertilizer panel, moss-microbe complex biofertilizer, legume-rhizobia Mars-simulant symbiosis) had no rendered HTML pages. Generate them and add them to the faceted browser + landing index (count 300 -> 304). Their modeled_environment -> ENVO:01000747 "regolith" block renders as intended (finishes NEXT_TASKS §2's modeled_environment page-regen item for the records added since #221). Pure whitespace-only re-render drift on the other 300 pages is left out to keep the diff focused. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
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…#240) Reconcile-before-relay caught the claw#7 section marking two shipped items as pending: - Datasets migration → DONE in PR #163 (associated_datasets ranges over the shared Dataset class; 149 records validate; no old fields remain). - QC dashboard → DONE in PR #165 (just gen-qc-dashboard; shared kg_microbe_qc). - knowledge-gap-scan recipe → DONE in PR #166 (was noted "still pending"). Also mark the modeled_environment docs page-regen done (#221 + #239) in §2, bump the causal record count to /304, and log the Edison auth blocker on the next causal target (CommunityMech:000190). Refresh the committed QC dashboard artifact from 300 → 304 records (0 FAIL, overall 75.7% coverage). Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
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Pull request overview
This PR checks in the newly rendered documentation pages for four regolith-focused community records (CommunityMech:000308–000311), and updates the docs landing page and faceted browser to reflect the new total community count.
Changes:
- Add 4 missing
docs/communities/*.htmlpages for the regolith records (000308–000311). - Update
docs/browser.htmlto include the 4 new cards and update the displayed total (300 → 304). - Update
docs/index.htmlstats to reflect 304 communities.
Reviewed changes
Copilot reviewed 6 out of 6 changed files in this pull request and generated 4 comments.
Show a summary per file
| File | Description |
|---|---|
| docs/index.html | Updates landing-page community count to 304. |
| docs/browser.html | Updates browser total count and adds cards linking to the 4 new community pages. |
| docs/communities/Mars_Meteorite_EETA79001_Growth_Panel.html | New rendered page for CommunityMech:000308 (regolith, no interactions). |
| docs/communities/Mars_Regolith_Cyanobacteria_Biofertilizer_Panel.html | New rendered page for CommunityMech:000309 (regolith, no interactions). |
| docs/communities/Moss_Microbe_Complex_Regolith_Biofertilizer.html | New rendered page for CommunityMech:000310 (includes interaction section + network diagram). |
| docs/communities/Legume_Rhizobia_Mars_Simulant_Symbiosis.html | New rendered page for CommunityMech:000311 (includes interaction section + network diagram). |
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| var srcKey = "Sinorhizobium spp. (rhizobial symbionts)"; | ||
| if (taxonNodeIds[srcKey]) { | ||
| links.push({ source: taxonNodeIds[srcKey], target: intId }); | ||
| } |
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| var tgtKey = "Medicago truncatula (host legume)"; | ||
| if (taxonNodeIds[tgtKey]) { | ||
| links.push({ source: intId, target: taxonNodeIds[tgtKey] }); | ||
| } |
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| var srcKey = "Hypnum plumaeforme (moss host)"; | ||
| if (taxonNodeIds[srcKey]) { | ||
| links.push({ source: taxonNodeIds[srcKey], target: intId }); | ||
| } |
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| var tgtKey = "Hordeum vulgare (barley model crop)"; | ||
| if (taxonNodeIds[tgtKey]) { | ||
| links.push({ source: intId, target: taxonNodeIds[tgtKey] }); | ||
| } |
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What
Generates the missing
docs/communities/*.htmlpages for the four space-regolith records curated in #232/#233, and adds them to the faceted browser (docs/browser.html) + landing index (docs/index.html, count 300 → 304):Mars_Meteorite_EETA79001_Growth_Panel(000308)Mars_Regolith_Cyanobacteria_Biofertilizer_Panel(000309)Moss_Microbe_Complex_Regolith_Biofertilizer(000310)Legume_Rhizobia_Mars_Simulant_Symbiosis(000311)Why
These records shipped without rendered pages (304 YAML vs 300 HTML). Each carries a
modeled_environment → ENVO:01000747 "regolith"block, which now renders as intended — closing themodeled_environmentpage-regen follow-up in NEXT_TASKS §2 for the records added since #221.Scope note
just gen-htmlalso produced a whitespace-only inserted line on the other ~277 pages (pre-existing template-render drift, cosmetic). That churn is intentionally left out to keep this diff focused on the four new pages + browser/index. A separate mechanical re-render can absorb the whitespace drift if desired.Verification
modeled_environmentsection (grep-confirmed).docs/is not a CI-gated path; doc-only change.🤖 Generated with Claude Code