Merge pull request #3317 from VWS-Python/codex/refresh-deps-dependabot-20261020

Refresh Python dependencies and repair Dependabot updates

Author: adamtheturtle

.github/dependabot.yml

@@ -3,6 +3,8 @@ version: 2
 
 updates:
   - package-ecosystem: pip
+    allow:
+      - dependency-type: all
     directory: /
     schedule:
       interval: daily
@@ -13,7 +15,5 @@ updates:
       interval: daily
     open-pull-requests-limit: 10
 
-  - package-ecosystem: pre-commit
-    directory: /
-    schedule:
-      interval: daily
+  # Dependabot cannot read prek.toml yet:
+  # https://github.com/dependabot/dependabot-core/issues/14624

pyproject.toml

@@ -55,10 +55,10 @@ dev = [
     "interrogate==1.7.0",
     "mypy==2.4.0",
     "mypy-pytest-parametrize==2026.10.5.1",
-    "mypy-strict-kwargs==2026.10.9",
+    "mypy-strict-kwargs==2026.10.19",
     "myst-parser==5.1.0",
     "no-defaults==2026.9.1",
-    "prek==0.5.5",
+    "prek==0.5.6",
     "pydocstringformatter==1.0.0",
     "pydocstyle==6.3",
     "pygments==2.21.0",
@@ -80,7 +80,7 @@ dev = [
     "shellcheck-py==0.11.0.1",
     "shfmt-py==4.2.0",
     "snapper-fmt==0.11.10",
-    "sphinx==9.1.0",
+    "sphinx==9.1.1",
     "sphinx-copybutton==0.5.2",
     "sphinx-lint==1.0.2",
     "sphinx-pyproject==0.3.0",